bacteria_taxonomy
Table of Contents
a brief taxonomy of bacteria
introduction
- bacteria were the earliest forms of prokaryotes (organisms that lack a cell nucleus), it is thought the first to evolve were the Gram +ve bacteria (these do not have a bacterial outer membrane), then the Gram -ves (which do have an outer membrane).
- it is thought that the group of organisms classed in the domain Archaea evolved later and separately from bacteria and although they look like bacteria (particularly, Gram +ve bacteria), have different metabolic pathways and genes that are more similar to eukaryota.
- the classification of archaea, and of prokaryotes in general, is a rapidly moving and contentious field.
- it is thought the earliest prokaryotic organisms that evolved were related to the Gram-positive bacteria and that Archaea evolved from Gram-positive bacteria in response to the antibiotic selection pressure (from the antibiotics produced by Gram +ve bacteria).
- the largest known bacteria is the Thiomargarita magnifica in mangroves in French Carribean, and which looks like a vermicelli noodle growing 1-2cm long (5000 x longer than most bacteria) and visible to the naked eye!! It has a genome of 12,000 genes - 3-4x that of most bacteria, and it stores 37,000 copies of its genome per mm - the largest number of any bacterial cell.
- the following taxonomy is grouped into Phyla then:
- Class
- Order (suffix ales)
- Family (suffix aceae)
Gram +ve bacteria
Firmicutes
- Bacilli
- Bacillales
- Alicyclobacillaceae
- Bacillaceae
- Caryophanaceae
- Listeriaceae
- Paenibacillaceae
- Planococcaceae
- Sporolactobacillaceae
- Staphylococcaceae
- Thermoactinomycetaceae
- Turicibacteraceae
-
- Aerococcaceae
- Carnobacteriaceae
- Enterococcaceae
- Lactobacillaceae
- Leuconostocaceae
- Streptococcaceae
-
- Clostridia
- Clostridiales
- Halanaerobiales
- Thermoanaerobacterales
- Natranaerobiales
- Tenericutes/Mollicutes
- Mycoplasmatales
- Entomoplasmatales
- Anaeroplasmatales
- Acholeplasmatales
- Haloplasmatales
- Negativicutes
- Selenomonadales
- Erysipelotrichi
- Erysipelotrichiales
Actinobacteria
- Actinomycetales
- Corynebacterineae
- Mycobacteriaceae
- Mycobacterium
- Bifidobacteriales
- Acidimicrobiales
- Coriobacteriales
- Nitriliruptorales
- Rubrobacterales
- Thermoleophilales
- Solirubrobacterales
Gram -ve bacteria
Terrabacteria
- Eobacteria
- Cyanobacteria
- Thermodesulfobacteria
- thermophiles
Proteobacteria
- Alpha
- Caulobacterales
- Kiloniellales
- Kordiimonadales
- Parvularculales
- Rhizobiales
- Rhodobacterales
- Rhodospirillales
- Rickettsiales
- Sneathiellales
- Sphingomonadales
- Beta
- Burkholderiales
- Hydrogenophilales
- Methylophilales
- Neisseriales
- Nitrosomonadales
- Procabacteriales
- Rhodocyclales
- Gamma
- Acidithiobacillales
- Aeromonadales
- Alteromonadales
- Cardiobacteriales
- Chromatiales
- Enterobacteriales
- Legionellales
- Methylococcales
- Pseudomonadales
- Pseudomonadaceae
- Delta
- Bdellovibrionales
- Desulfarculales
- Desulfobacterales
- Desulfovibrionales
- Desulfurellales
- Desulfuromonadales
- Myxococcales
- Syntrophobacterales
- Epsilon
- Campylobacterales
- Nautiliales
BV4
- Spirochaetes
- Spirochaetes
- Sphingobacteria
- Fibrobacteres
- Chlorobi
- Bacteroidetes
- Planctobateria
- Chlamydiae
- Verrucomicrobia
- Planctomycetes
- other Gram negative
- Acidobacteria
- Chrysiogenetes
- Deferribacteres
- Fusobacteria
- Gemmatimonadetes
- Nitrospirae
- Synergistetes
- Dictyoglomi
- Lentisphaerae
bacteria_taxonomy.txt · Last modified: 2023/12/14 01:55 by gary1